CIRCexplorer2 2.3.3

CIRCexplorer2 is a comprehensive and integrative circular RNA analysis toolset. It is the successor of CIRCexplorer with plenty of new features to facilitate circular RNA identification and characterization.

Accessing the software

To load the module:

$ module load CIRCexplorer2/2.3.3-iomkl-2018a-Python-2.7.14

An example command to include in your job script:

$ CIRCexplorer2 align -G hg19_kg.gtf -f RNA_seq.fastq > CIRCexplorer2_align.log

Accessing Previous Versions

Wherever possible, previous versions of this application will be retained for continuity, especially for research projects that require a consistent version of the software throughout the project. Such versions, however, may be unsupported by IT Services or the applications vendor, and may be withdrawn at short or no notice if they can no longer run on the cluster - for example, essential operating system upgrades may be incompatible with old versions.

At present there are no previous versions of this application on the BlueBEAR service.

Known Problems & Limitations


Other Information

The Support Level for this application is An

Visit the website for more information regarding this application.

Last modified: 14 August 2018