BioPerl 1.7.1

BioPerl is a collection of Perl modules that facilitate the development of Perl scripts for bioinformatics applications. The BioPerl Project is maintained by an international community of users and developers and has played an integral role in the Human Genome Project.

Accessing the software

To load the module:

$ module load apps/bioperl/1.7.1-perl-5.22.1

This application contains Perl modules which can be viewed at ${BIOPERL_ROOT}/lib/perl5/site_perl/5.22.1/ as well as a collection of scripts at ${BIOPERL_ROOT}/bin.

Accessing Previous Versions

Wherever possible, previous versions of this application will be retained for continuity, especially for research projects that require a consistent version of the software throughout the project. Such versions, however, may be unsupported by IT Services or the applications vendor, and may be withdrawn at short or no notice if they can no longer run on the cluster - for example, essential operating system upgrades may be incompatible with old versions.

At present there are no previous versions of this application on the BlueBEAR service.

Known Problems & Limitations

None.

Other Information

The Support Level for this application is An.

Visit the BioPerl website for more information regarding this application.


Last modified: 14 August 2017