Extra Python Libraries

The following table is a collection of the extra Python libraries available on BlueBEAR, BEARCloud and CaStLeS VMs.

List of currently installed libraries
Package Version
astropy 2.0.2
Atomic Simulation Environment (ASE) 3.8.1.3440          
basemap 1.0.7
blimpy e0e3395          
chempy 0.5.1          
commentjson 0.6          
Cython 0.24.1          
deepTools 3.0.1          
Edlib 1.2.3.post1
feather-format 0.3.1           
fluff 2.1.4          
GDAL 2.2.3          
h5py 2.7.0          
HDDM 0.6.1          
healpy 1.10.3          
Keras 2.2.0
Lumpy 0.2.12
matplotlib 3.0.0
MEEP 1.6.0
memory_profiler 0.54.0
Mercurial 4.4.1
MultiQC 1.5
mysql-connector-python 8.0.12
mysqlclient 1.3.13
netcdf4-python 1.4.0
phonopy 1.13.2.13
Pillow 5.0.0
pVACtools 1.0.4
pybedtools 0.7.10
PyDNase 0.2.0
pyFFTW 0.10.4
PyGamma 731c0f1
PyMOL 2.1.0_0
pymzML 2.0.5
PyTorch 0.4.1
PyWavelets 1.0.1
RSeqC 2.6.4
scikit-learn 0.19.0
Stampy 1.0.28
TensorFlow 1.10.1
Theano 0.9.0
Tombo 1.4.0
torchvision 0.2.1

Last modified: 9 April 2019